Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BVU_RS11405 | Not Available | Positive | 2928588 - 2929409 | 31598.5 |
| transposase | BVU_RS11410 | Not Available | Positive | 2929557 - 2930915 | 52906.8 |
| tetratricopeptide repeat protein | BVU_RS11415 | Not Available | Negative | 2931072 - 2933267 | 86640.1 |
| duf418 domain-containing protein | BVU_RS11420 | Not Available | Negative | 2933329 - 2934513 | 45032.6 |
| transcription-repair coupling factor | BVU_RS11425 | Not Available | Positive | 2934621 - 2937986 | 127092.0 |
| tonb family protein | BVU_RS11430 | Not Available | Positive | 2938251 - 2938937 | 25600.7 |
| amidohydrolase | BVU_RS11435 | Not Available | Positive | 2939129 - 2939890 | 28511.8 |
| thiamine pyrophosphate-dependent enzyme | BVU_RS11440 | Not Available | Positive | 2939914 - 2941530 | 58851.5 |
| indolepyruvate oxidoreductase subunit beta | BVU_RS11445 | Not Available | Positive | 2941527 - 2942108 | 21245.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | BVU_RS11450 | Not Available | Positive | 2942113 - 2943417 | 48672.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

