Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligogalacturonate lyase family protein | BVU_RS00850 | Not Available | Negative | 255095 - 256420 | 49976.5 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS00855 | Not Available | Negative | 256636 - 258945 | 86748.5 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS00860 | Not Available | Negative | 258977 - 262270 | 121805.0 |
| tyrosine-type recombinase/integrase | BVU_RS00865 | Not Available | Negative | 262638 - 263819 | 45990.3 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS00870 | Not Available | Positive | 264108 - 265703 | 57592.2 |
| is982 family transposase | BVU_RS00875 | Not Available | Negative | 265722 - 266627 | 35030.2 |
| helix-turn-helix transcriptional regulator | BVU_RS00880 | Not Available | Positive | 266736 - 268298 | 57881.2 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS00885 | Not Available | Positive | 268330 - 270468 | 79373.8 |
| hypothetical protein | BVU_RS00890 | Not Available | Positive | 270558 - 270875 | 12135.9 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | BVU_RS00895 | Not Available | Positive | 271119 - 272900 | 66681.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

