Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | BVU_RS10265 | Not Available | Positive | 2621320 - 2621910 | 23285.1 |
| fecr family protein | BVU_RS10270 | Not Available | Positive | 2621981 - 2622994 | 39115.7 |
| tonb-dependent receptor | BVU_RS10275 | Not Available | Positive | 2623244 - 2626564 | 122257.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS10280 | Not Available | Positive | 2626578 - 2628266 | 64144.1 |
| hypothetical protein | BVU_RS10285 | Not Available | Positive | 2628284 - 2629960 | 63050.8 |
| abc-f family atp-binding cassette domain-containing protein | BVU_RS10290 | Not Available | Positive | 2630357 - 2632300 | 73597.2 |
| m13 family metallopeptidase | BVU_RS10295 | Not Available | Positive | 2632326 - 2634362 | 75873.1 |
| duf6769 family protein | BVU_RS10300 | Not Available | Positive | 2634392 - 2634895 | 19120.3 |
| efflux rnd transporter periplasmic adaptor subunit | BVU_RS10305 | Not Available | Positive | 2634990 - 2636249 | 45795.5 |
| efflux rnd transporter permease subunit | BVU_RS10310 | Not Available | Positive | 2636261 - 2639344 | 112452.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

