Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin/lipoyl-containing protein | BVU_RS10010 | Not Available | Positive | 2554395 - 2556257 | 69025.7 |
| sodium ion-translocating decarboxylase subunit beta | BVU_RS10015 | Not Available | Positive | 2556257 - 2557492 | 44261.9 |
| tlpa family protein disulfide reductase | BVU_RS10020 | Not Available | Negative | 2557687 - 2559036 | 50412.1 |
| thioredoxin family protein | BVU_RS10025 | Not Available | Negative | 2559038 - 2560204 | 44550.2 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS10030 | Not Available | Negative | 2560223 - 2561713 | 55759.7 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS10035 | Not Available | Negative | 2561734 - 2565051 | 122704.0 |
| fecr family protein | BVU_RS10040 | Not Available | Negative | 2565104 - 2566255 | 43733.0 |
| rna polymerase sigma factor | BVU_RS10045 | Not Available | Negative | 2566323 - 2566907 | 23161.5 |
| glycoside hydrolase 43 family protein | BVU_RS10050 | Not Available | Negative | 2567008 - 2568672 | 61567.8 |
| duf4861 domain-containing protein | BVU_RS10055 | Not Available | Negative | 2568686 - 2569900 | 45677.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

