Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase rsmf c-terminal domain-like protein | BVU_RS09905 | Not Available | Positive | 2530936 - 2532363 | 53400.0 |
| dna topoisomerase 3 | BVU_RS09910 | Not Available | Negative | 2532500 - 2534641 | 79859.0 |
| pepsy-like domain-containing protein | BVU_RS09915 | Not Available | Positive | 2534915 - 2535781 | 33184.5 |
| thioesterase family protein | BVU_RS09920 | Not Available | Positive | 2536013 - 2536387 | 13047.7 |
| aaa domain-containing protein | BVU_RS09925 | Not Available | Negative | 2536571 - 2538463 | 72814.7 |
| aconitate hydratase | BVU_RS09930 | Not Available | Positive | 2538635 - 2540878 | 81027.5 |
| nadp-dependent isocitrate dehydrogenase | BVU_RS09935 | Not Available | Positive | 2540882 - 2542027 | 41451.8 |
| citrate/2-methylcitrate synthase | BVU_RS09940 | Not Available | Positive | 2542040 - 2543383 | 51048.6 |
| gnat family n-acetyltransferase | BVU_RS09950 | Not Available | Negative | 2544041 - 2544502 | 17929.7 |
| duf1295 domain-containing protein | BVU_RS09955 | Not Available | Positive | 2545071 - 2545835 | 29496.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

