Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase 115 family protein | BVU_RS00790 | Not Available | Negative | 233203 - 235554 | 89559.1 |
| helix-turn-helix transcriptional regulator | BVU_RS21135 | Not Available | Positive | 235806 - 235913 | 4198.2 |
| helix-turn-helix transcriptional regulator | BVU_RS22975 | Not Available | Negative | 236625 - 237777 | 42809.6 |
| helix-turn-helix transcriptional regulator | BVU_RS00815 | Not Available | Positive | 238856 - 240406 | 60611.1 |
| duf6250 domain-containing protein | BVU_RS00820 | Not Available | Negative | 240544 - 243843 | 124967.0 |
| rhamnogalacturonan acetylesterase | BVU_RS00825 | Not Available | Negative | 243865 - 245508 | 60873.2 |
| rhamnogalacturonan lyase | BVU_RS00830 | Not Available | Negative | 245656 - 247500 | 67741.0 |
| glycoside hydrolase family 2 protein | BVU_RS00835 | Not Available | Negative | 247607 - 250612 | 114601.0 |
| glycosyl hydrolase | BVU_RS00840 | Not Available | Negative | 250818 - 253673 | 106505.0 |
| arylsulfatase | BVU_RS00845 | Not Available | Negative | 253687 - 255081 | 51599.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

