Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl co-a mutase-associated gtpase meab | BVU_RS09800 | Not Available | Positive | 2515940 - 2517037 | 40361.6 |
| 6-phosphofructokinase | BVU_RS09805 | Not Available | Negative | 2517126 - 2518106 | 35428.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | BVU_RS09810 | Not Available | Negative | 2518188 - 2519054 | 32600.1 |
| (d)cmp kinase | BVU_RS09815 | Not Available | Negative | 2519047 - 2519736 | 25718.8 |
| energy transducer tonb | BVU_RS09820 | Not Available | Positive | 2519922 - 2520605 | 25649.9 |
| polyprenyl synthetase family protein | BVU_RS09825 | Not Available | Positive | 2520687 - 2521664 | 36822.8 |
| tatd family hydrolase | BVU_RS09830 | Not Available | Positive | 2521666 - 2522439 | 29294.3 |
| Trna-ser | Not Available | Not Available | Positive | 2522607 - 2522694 | Not Available |
| mota/tolq/exbb proton channel family protein | BVU_RS09840 | Not Available | Positive | 2522782 - 2523555 | 27566.2 |
| hypothetical protein | BVU_RS09845 | Not Available | Positive | 2523563 - 2524024 | 16708.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

