Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rsmd family rna methyltransferase | BVU_RS09645 | Not Available | Negative | 2478509 - 2479069 | 21391.4 |
| duf3822 family protein | BVU_RS09650 | Not Available | Negative | 2479060 - 2479884 | 32356.9 |
| hypothetical protein | BVU_RS09655 | Not Available | Negative | 2479887 - 2480573 | 25516.8 |
| atp-dependent dna helicase | BVU_RS09660 | Not Available | Positive | 2480671 - 2482089 | 53922.6 |
| alanine--trna ligase | BVU_RS09665 | Not Available | Negative | 2482411 - 2485029 | 97398.6 |
| m23 family metallopeptidase | BVU_RS09670 | Not Available | Positive | 2485169 - 2486137 | 36405.9 |
| merr family transcriptional regulator | BVU_RS09675 | Not Available | Positive | 2486171 - 2486518 | 13742.9 |
| rela/spot family protein | BVU_RS09680 | Not Available | Negative | 2486610 - 2488880 | 86308.9 |
| lytic transglycosylase domain-containing protein | BVU_RS09685 | Not Available | Negative | 2488982 - 2490244 | 47706.3 |
| duf5683 domain-containing protein | BVU_RS09690 | Not Available | Negative | 2490249 - 2491010 | 29112.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

