Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | BVU_RS09445 | Not Available | Negative | 2434060 - 2435136 | 39686.0 |
| m28 family metallopeptidase | BVU_RS09450 | Not Available | Negative | 2435223 - 2436242 | 38319.7 |
| ribosome small subunit-dependent gtpase a | BVU_RS09455 | Not Available | Negative | 2436256 - 2437188 | 35098.8 |
| ribosome recycling factor | BVU_RS09460 | Not Available | Negative | 2437309 - 2437869 | 20738.2 |
| atp-binding protein | BVU_RS09465 | Not Available | Positive | 2438108 - 2439688 | 61227.0 |
| histidine phosphatase family protein | BVU_RS09470 | Not Available | Positive | 2440091 - 2440609 | 19475.5 |
| duf4450 domain-containing protein | BVU_RS09475 | Not Available | Negative | 2440632 - 2443889 | 121671.0 |
| glycoside hydrolase n-terminal domain-containing protein | BVU_RS09480 | Not Available | Negative | 2443914 - 2446022 | 79965.1 |
| glycoside hydrolase family 105 protein | BVU_RS09485 | Not Available | Negative | 2446077 - 2447315 | 47227.3 |
| ump kinase | BVU_RS09490 | Not Available | Negative | 2447573 - 2448283 | 25575.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

