Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | BVU_RS09395 | Not Available | Positive | 2413702 - 2416719 | 112076.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS09400 | Not Available | Positive | 2416743 - 2418329 | 58738.4 |
| gtpase hflx | BVU_RS09405 | Not Available | Positive | 2418421 - 2419674 | 47629.5 |
| duf4954 family protein | BVU_RS09410 | Not Available | Positive | 2419688 - 2421673 | 74507.4 |
| coce/nond family hydrolase | BVU_RS09415 | Not Available | Negative | 2421821 - 2423728 | 73920.9 |
| fumarate hydratase | BVU_RS09420 | Not Available | Positive | 2423867 - 2425510 | 60487.7 |
| alpha-n-acetylglucosaminidase | BVU_RS09425 | Not Available | Positive | 2425613 - 2427769 | 82818.5 |
| amino acid permease | BVU_RS09430 | Not Available | Negative | 2427942 - 2429600 | 59786.5 |
| tolc family protein | BVU_RS09435 | Not Available | Negative | 2429689 - 2431008 | 50562.7 |
| efflux rnd transporter permease subunit | BVU_RS09440 | Not Available | Negative | 2431005 - 2434040 | 112074.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

