Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | BVU_RS09290 | Not Available | Negative | 2377698 - 2378993 | 49710.2 |
| Trna-lys | Not Available | Not Available | Positive | 2380095 - 2380170 | Not Available |
| ai-2e family transporter | BVU_RS09300 | Not Available | Negative | 2380262 - 2381398 | 42742.1 |
| thymidine kinase | BVU_RS09305 | Not Available | Negative | 2381409 - 2382008 | 22372.9 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | BVU_RS09310 | Not Available | Positive | 2382213 - 2382887 | 24887.2 |
| hypothetical protein | BVU_RS09315 | Not Available | Positive | 2382916 - 2383764 | 31533.4 |
| yjjg family noncanonical pyrimidine nucleotidase | BVU_RS09320 | Not Available | Positive | 2383840 - 2384529 | 26926.8 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS09325 | Not Available | Negative | 2384680 - 2386155 | 54874.2 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS09330 | Not Available | Negative | 2386184 - 2389192 | 111374.0 |
| site-specific integrase | BVU_RS09335 | Not Available | Positive | 2389560 - 2390720 | 44925.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

