Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BVU_RS22735 | Not Available | Positive | 2326334 - 2326560 | 8840.62 |
| hypothetical protein | BVU_RS09145 | Not Available | Positive | 2326855 - 2329401 | 94970.7 |
| pectinesterase family protein | BVU_RS09150 | Not Available | Positive | 2329437 - 2330984 | 56683.7 |
| rna polymerase sigma-70 factor | BVU_RS09155 | Not Available | Positive | 2331049 - 2331612 | 22518.2 |
| fecr family protein | BVU_RS09160 | Not Available | Positive | 2331683 - 2332615 | 35880.6 |
| tonb-dependent receptor | BVU_RS09165 | Not Available | Positive | 2332671 - 2335970 | 122190.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS09170 | Not Available | Positive | 2335989 - 2337677 | 64111.6 |
| glycoside hydrolase family 2 protein | BVU_RS09175 | Not Available | Positive | 2337763 - 2340792 | 114500.0 |
| sugar-binding domain-containing protein | BVU_RS09180 | Not Available | Positive | 2340795 - 2344163 | 126868.0 |
| glycoside hydrolase family 31 protein | BVU_RS09185 | Not Available | Positive | 2344177 - 2346561 | 91754.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

