Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BVU_RS09095 | Not Available | Positive | 2307568 - 2308308 | 28001.5 |
| dead/deah box helicase | BVU_RS09100 | Not Available | Positive | 2308330 - 2311656 | 128327.0 |
| mfs transporter | BVU_RS09105 | Not Available | Negative | 2311710 - 2313185 | 54265.1 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | BVU_RS09110 | Not Available | Negative | 2313405 - 2314361 | 35966.2 |
| pts galactitol transporter subunit iic | BVU_RS09115 | Not Available | Negative | 2314380 - 2315771 | 49974.0 |
| glycoside hydrolase family 105 protein | BVU_RS09120 | Not Available | Positive | 2316061 - 2317290 | 47064.1 |
| pectinesterase family protein | BVU_RS09125 | Not Available | Positive | 2317305 - 2318255 | 35857.5 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS09130 | Not Available | Positive | 2318473 - 2321745 | 118852.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS09135 | Not Available | Positive | 2321778 - 2323943 | 79682.8 |
| sumf1/egtb/pvdo family nonheme iron enzyme | BVU_RS09140 | Not Available | Positive | 2324323 - 2326311 | 75029.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

