Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS09050 | Not Available | Positive | 2290622 - 2292562 | 74861.8 |
| glycoside hydrolase family 88 protein | BVU_RS09055 | Not Available | Positive | 2292656 - 2293777 | 43052.3 |
| duf2264 domain-containing protein | BVU_RS09060 | Not Available | Positive | 2293791 - 2295053 | 48386.9 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | BVU_RS09065 | Not Available | Positive | 2295065 - 2297635 | 98048.9 |
| hypothetical protein | BVU_RS22730 | Not Available | Positive | 2297944 - 2298177 | 8899.8 |
| family 78 glycoside hydrolase catalytic domain | BVU_RS09070 | Not Available | Positive | 2298224 - 2300158 | 73084.5 |
| two-component regulator propeller domain-containing protein | BVU_RS09075 | Not Available | Positive | 2300310 - 2303096 | 106132.0 |
| aldehyde dehydrogenase | BVU_RS09080 | Not Available | Positive | 2303312 - 2304748 | 52528.1 |
| glycoside hydrolase family 43 protein | BVU_RS09085 | Not Available | Positive | 2304934 - 2305938 | 38218.6 |
| glycoside hydrolase family 140 protein | BVU_RS09090 | Not Available | Positive | 2306008 - 2307471 | 55585.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

