Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS09005 | Not Available | Negative | 2274988 - 2276790 | 69774.8 |
| tonb-dependent receptor | BVU_RS09010 | Not Available | Negative | 2276805 - 2280152 | 125111.0 |
| fecr family protein | BVU_RS09015 | Not Available | Negative | 2280445 - 2281458 | 38548.0 |
| rna polymerase sigma-70 factor | BVU_RS09020 | Not Available | Positive | 2281603 - 2282169 | 22251.9 |
| hu family dna-binding protein | BVU_RS09025 | Not Available | Negative | 2282362 - 2283042 | 25970.1 |
| duf3874 domain-containing protein | BVU_RS09030 | Not Available | Positive | 2283371 - 2284768 | 53110.1 |
| duf1573 domain-containing protein | BVU_RS21510 | Not Available | Positive | 2284976 - 2285161 | 6813.11 |
| rna polymerase sigma-70 factor | BVU_RS09035 | Not Available | Positive | 2285256 - 2285843 | 22882.6 |
| fecr family protein | BVU_RS09040 | Not Available | Positive | 2285962 - 2286906 | 35961.4 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS09045 | Not Available | Positive | 2287062 - 2290610 | 133464.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

