Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trk system potassium transporter trka | BVU_RS08955 | Not Available | Negative | 2258567 - 2259907 | 49307.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BVU_RS08960 | Not Available | Negative | 2259920 - 2261818 | 70238.9 |
| gscfa domain-containing protein | BVU_RS08965 | Not Available | Positive | 2261911 - 2262897 | 38641.5 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | BVU_RS08970 | Not Available | Positive | 2262873 - 2265338 | 92758.0 |
| duf4858 domain-containing protein | BVU_RS08975 | Not Available | Positive | 2265428 - 2265991 | 21541.2 |
| glycoside hydrolase family 28 protein | BVU_RS08980 | Not Available | Negative | 2266143 - 2267447 | 49160.9 |
| glycoside hydrolase family 2 protein | BVU_RS08985 | Not Available | Negative | 2267489 - 2270401 | 109734.0 |
| glycoside hydrolase family 28 protein | BVU_RS08990 | Not Available | Negative | 2270654 - 2272438 | 66068.3 |
| sgnh/gdsl hydrolase family protein | BVU_RS08995 | Not Available | Positive | 2272651 - 2273346 | 26850.2 |
| sulfatase | BVU_RS09000 | Not Available | Negative | 2273550 - 2274983 | 54892.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

