Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | BVU_RS00690 | Not Available | Negative | 207253 - 207798 | 21359.8 |
| glycoside hydrolase family 88 protein | BVU_RS00695 | Not Available | Negative | 207823 - 209049 | 46537.6 |
| two-component regulator propeller domain-containing protein | BVU_RS00700 | Not Available | Negative | 209285 - 212089 | 106145.0 |
| Trna-met | Not Available | Not Available | Positive | 212263 - 212336 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 212396 - 212472 | Not Available |
| start-like domain-containing protein | BVU_RS00715 | Not Available | Positive | 212676 - 213062 | 15266.2 |
| lptf/lptg family permease | BVU_RS00720 | Not Available | Positive | 213146 - 215044 | 72527.6 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | BVU_RS00725 | Not Available | Positive | 215047 - 216261 | 44935.4 |
| pyridoxal phosphate-dependent aminotransferase | BVU_RS00730 | Not Available | Positive | 216387 - 217580 | 43067.4 |
| 4fe-4s binding protein | BVU_RS00735 | Not Available | Negative | 217758 - 217925 | 5717.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

