Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpn family recombination-promoting nuclease/putative transposase | BVU_RS08665 | Not Available | Negative | 2197524 - 2198402 | 33857.3 |
| hypothetical protein | BVU_RS08670 | Not Available | Negative | 2198547 - 2198771 | 8677.53 |
| hypothetical protein | BVU_RS22515 | Not Available | Positive | 2199223 - 2199390 | 5610.93 |
| helix-turn-helix transcriptional regulator | BVU_RS08675 | Not Available | Positive | 2199577 - 2200302 | 27855.3 |
| hypothetical protein | BVU_RS22720 | Not Available | Positive | 2200443 - 2200565 | 4826.88 |
| rna polymerase sigma-70 factor | BVU_RS08680 | Not Available | Negative | 2200733 - 2201317 | 22719.5 |
| fecr family protein | BVU_RS08685 | Not Available | Positive | 2201422 - 2202441 | 38875.4 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS08690 | Not Available | Positive | 2202685 - 2206077 | 124351.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS08695 | Not Available | Positive | 2206090 - 2207493 | 52201.3 |
| glycerophosphodiester phosphodiesterase family protein | BVU_RS08700 | Not Available | Positive | 2207498 - 2208433 | 35441.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

