Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | BVU_RS08515 | Not Available | Positive | 2164910 - 2166283 | 50273.8 |
| duf4934 domain-containing protein | BVU_RS08520 | Not Available | Negative | 2166364 - 2167596 | 46086.7 |
| duf3332 domain-containing protein | BVU_RS08525 | Not Available | Negative | 2167677 - 2168228 | 19884.6 |
| mfs transporter | BVU_RS08530 | Not Available | Positive | 2168402 - 2169790 | 51163.3 |
| duf4831 family protein | BVU_RS08535 | Not Available | Negative | 2169872 - 2170921 | 38658.6 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | BVU_RS08540 | Not Available | Negative | 2170958 - 2172493 | 56216.5 |
| hypoxanthine phosphoribosyltransferase | BVU_RS08545 | Not Available | Positive | 2172613 - 2173149 | 20092.5 |
| adenylate kinase | BVU_RS08550 | Not Available | Positive | 2173190 - 2173759 | 20885.2 |
| gtpase obge | BVU_RS08555 | Not Available | Positive | 2173875 - 2175059 | 44180.3 |
| peptidoglycan editing factor pgef | BVU_RS08560 | Not Available | Positive | 2175056 - 2175838 | 28811.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

