Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | BVU_RS00640 | Not Available | Negative | 182562 - 185888 | 122473.0 |
| sigma-70 family rna polymerase sigma factor | BVU_RS00645 | Not Available | Negative | 185932 - 186447 | 20705.7 |
| two-component regulator propeller domain-containing protein | BVU_RS00650 | Not Available | Negative | 186648 - 189461 | 106672.0 |
| heparinase ii/iii family protein | BVU_RS00655 | Not Available | Negative | 189620 - 192358 | 102960.0 |
| hypothetical protein | BVU_RS00660 | Not Available | Negative | 192448 - 194049 | 60317.0 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | BVU_RS00665 | Not Available | Positive | 194185 - 196551 | 87829.0 |
| gh92 family glycosyl hydrolase | BVU_RS00670 | Not Available | Negative | 196705 - 200130 | 130581.0 |
| glycoside hydrolase family 97 protein | BVU_RS00675 | Not Available | Negative | 200127 - 202061 | 73702.6 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS00680 | Not Available | Negative | 202213 - 204039 | 68586.7 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS00685 | Not Available | Negative | 204050 - 207127 | 113749.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

