Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexapeptide transferase family protein | BVU_RS22710 | Not Available | Positive | 2034136 - 2034258 | 4045.03 |
| glycoside hydrolase family 88 protein | BVU_RS07855 | Not Available | Positive | 2034265 - 2035458 | 45823.0 |
| wecb/taga/cpsf family glycosyltransferase | BVU_RS07860 | Not Available | Positive | 2035471 - 2036169 | 27114.1 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | BVU_RS07865 | Not Available | Positive | 2036181 - 2037341 | 43449.7 |
| hypothetical protein | BVU_RS22510 | Not Available | Positive | 2037630 - 2037800 | 6301.56 |
| arm dna-binding domain-containing protein | BVU_RS07870 | Not Available | Positive | 2038237 - 2038545 | 11928.7 |
| helicase associated domain protein | BVU_RS07875 | Not Available | Positive | 2038570 - 2040831 | 87567.0 |
| hybrid sensor histidine kinase/response regulator | BVU_RS07880 | Not Available | Positive | 2041161 - 2043536 | 90287.3 |
| sigma-54-dependent transcriptional regulator | BVU_RS07885 | Not Available | Positive | 2043481 - 2044785 | 48737.6 |
| hypothetical protein | BVU_RS07890 | Not Available | Negative | 2044791 - 2045285 | 18854.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

