Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase 43 family protein | BVU_RS00590 | Not Available | Negative | 164758 - 166407 | 61781.2 |
| glycoside hydrolase family 97 protein | BVU_RS00595 | Not Available | Negative | 166561 - 168498 | 73670.1 |
| hypothetical protein | BVU_RS00600 | Not Available | Negative | 168640 - 171276 | 98794.7 |
| serine hydrolase domain-containing protein | BVU_RS00605 | Not Available | Negative | 171283 - 172368 | 39744.6 |
| glycoside hydrolase family 127 protein | BVU_RS00610 | Not Available | Negative | 172446 - 174368 | 73147.1 |
| glycosyl hydrolase family 28 protein | BVU_RS00615 | Not Available | Negative | 174495 - 175880 | 52288.7 |
| helix-turn-helix transcriptional regulator | BVU_RS00620 | Not Available | Negative | 175976 - 177588 | 59284.7 |
| pd-(d/e)xk nuclease family transposase | BVU_RS00625 | Not Available | Negative | 177753 - 178685 | 35845.9 |
| glycosyl hydrolase family 28 protein | BVU_RS00630 | Not Available | Negative | 178876 - 180312 | 53741.4 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS00635 | Not Available | Negative | 180512 - 182539 | 75440.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

