Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | BVU_RS07530 | Not Available | Positive | 1970042 - 1972516 | 91597.6 |
| rna polymerase sigma factor | BVU_RS07535 | Not Available | Positive | 1972685 - 1973188 | 19791.6 |
| vanz family protein | BVU_RS07540 | Not Available | Negative | 1973269 - 1973655 | 14818.4 |
| sodium-dependent transporter | BVU_RS07545 | Not Available | Positive | 1973751 - 1975115 | 49193.4 |
| comea family dna-binding protein | BVU_RS07550 | Not Available | Positive | 1975123 - 1976025 | 35330.7 |
| transposase | BVU_RS07555 | Not Available | Positive | 1976170 - 1977528 | 52906.8 |
| alkaline phosphatase | BVU_RS07560 | Not Available | Negative | 1977712 - 1979130 | 51615.1 |
| hypothetical protein | BVU_RS07565 | Not Available | Positive | 1979434 - 1979934 | 19273.6 |
| is1182 family transposase | BVU_RS07575 | Not Available | Positive | 1980542 - 1982197 | 65235.6 |
| hypothetical protein | BVU_RS07580 | Not Available | Negative | 1982491 - 1983687 | 47329.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

