Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pl29 family lyase n-terminal domain-containing protein | BVU_RS07480 | Not Available | Positive | 1959097 - 1961955 | 105416.0 |
| hypothetical protein | BVU_RS07485 | Not Available | Positive | 1962094 - 1962750 | 25861.1 |
| nudix domain-containing protein | BVU_RS07490 | Not Available | Positive | 1962701 - 1963591 | 34227.0 |
| polysaccharide biosynthesis protein | BVU_RS07495 | Not Available | Positive | 1963599 - 1964441 | 31291.1 |
| hypothetical protein | BVU_RS07500 | Not Available | Positive | 1964548 - 1964925 | 14077.9 |
| m20 family metallo-hydrolase | BVU_RS07505 | Not Available | Negative | 1964931 - 1965995 | 39103.8 |
| amp-dependent synthetase/ligase | BVU_RS07510 | Not Available | Positive | 1966209 - 1968014 | 68368.2 |
| peptide chain release factor 2 | BVU_RS07515 | Not Available | Positive | 1968072 - 1969187 | 42519.2 |
| hypothetical protein | BVU_RS22700 | Not Available | Positive | 1969280 - 1969411 | 4775.12 |
| cyth domain-containing protein | BVU_RS07525 | Not Available | Positive | 1969482 - 1969952 | 18287.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

