Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | BVU_RS07430 | Not Available | Positive | 1947075 - 1947638 | 21334.7 |
| duf2795 domain-containing protein | BVU_RS07435 | Not Available | Positive | 1947710 - 1947931 | 8716.91 |
| porin family protein | BVU_RS07440 | Not Available | Positive | 1948095 - 1948694 | 21550.2 |
| primosomal protein n' | BVU_RS07445 | Not Available | Positive | 1948767 - 1951229 | 93875.1 |
| phosphatase | BVU_RS07450 | Not Available | Positive | 1951277 - 1951987 | 26532.1 |
| low molecular weight protein-tyrosine-phosphatase | BVU_RS07455 | Not Available | Positive | 1951995 - 1952465 | 17874.5 |
| hd family phosphohydrolase | BVU_RS07460 | Not Available | Negative | 1952440 - 1954497 | 79191.8 |
| glutamate--trna ligase | BVU_RS07465 | Not Available | Positive | 1954579 - 1956096 | 57877.2 |
| 3-deoxy-d-manno-octulosonic acid transferase | BVU_RS07470 | Not Available | Positive | 1956109 - 1957329 | 46820.4 |
| helix-turn-helix domain-containing protein | BVU_RS07475 | Not Available | Positive | 1958531 - 1959019 | 18915.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

