Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pddexk nuclease domain-containing protein | BVU_RS07335 | Not Available | Negative | 1927217 - 1928356 | 44227.3 |
| helix-turn-helix transcriptional regulator | BVU_RS07340 | Not Available | Negative | 1928382 - 1928972 | 22147.7 |
| helix-turn-helix transcriptional regulator | BVU_RS07345 | Not Available | Positive | 1928965 - 1929423 | 17666.3 |
| duf3784 domain-containing protein | BVU_RS07350 | Not Available | Positive | 1929435 - 1929752 | 11703.0 |
| hypothetical protein | BVU_RS07355 | Not Available | Positive | 1930057 - 1930395 | 12594.3 |
| outer membrane beta-barrel protein | BVU_RS07360 | Not Available | Positive | 1930405 - 1932726 | 86847.5 |
| hypothetical protein | BVU_RS21445 | Not Available | Positive | 1932730 - 1933080 | 13439.4 |
| helix-turn-helix transcriptional regulator | BVU_RS07365 | Not Available | Negative | 1933021 - 1933785 | 29423.2 |
| is1182 family transposase | BVU_RS07370 | Not Available | Negative | 1933891 - 1935546 | 65441.8 |
| is982 family transposase | BVU_RS07375 | Not Available | Positive | 1935905 - 1936810 | 35030.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

