Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS00540 | Not Available | Negative | 149048 - 150859 | 69404.4 |
| tonb-dependent receptor | BVU_RS00545 | Not Available | Negative | 150877 - 154278 | 126025.0 |
| fecr family protein | BVU_RS00550 | Not Available | Negative | 154407 - 155381 | 37407.0 |
| rna polymerase sigma-70 factor | BVU_RS00555 | Not Available | Negative | 155510 - 156055 | 21780.4 |
| tlpa family protein disulfide reductase | BVU_RS00560 | Not Available | Negative | 156318 - 158426 | 80229.7 |
| peroxiredoxin family protein | BVU_RS00565 | Not Available | Negative | 158449 - 159639 | 44962.0 |
| tetratricopeptide repeat protein | BVU_RS00570 | Not Available | Negative | 159670 - 161013 | 51719.5 |
| m56 family metallopeptidase | BVU_RS00575 | Not Available | Negative | 161024 - 162910 | 70605.0 |
| blai/meci/copy family transcriptional regulator | BVU_RS00580 | Not Available | Negative | 162944 - 163306 | 14012.8 |
| glycoside hydrolase family 88 protein | BVU_RS00585 | Not Available | Negative | 163517 - 164740 | 46579.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

