Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sir2 family nad-dependent protein deacylase | BVU_RS07230 | Not Available | Positive | 1907502 - 1908200 | 25671.8 |
| rubredoxin | BVU_RS07235 | Not Available | Positive | 1908275 - 1908439 | 5868.75 |
| is1182 family transposase | BVU_RS07240 | Not Available | Positive | 1908689 - 1910344 | 65441.8 |
| polyribonucleotide nucleotidyltransferase | BVU_RS07245 | Not Available | Negative | 1910437 - 1912572 | 78631.8 |
| thioredoxin-like domain-containing protein | BVU_RS07250 | Not Available | Positive | 1912788 - 1913936 | 42886.3 |
| transcription elongation factor grea | BVU_RS07255 | Not Available | Positive | 1914137 - 1914601 | 16780.4 |
| hit family protein | BVU_RS07260 | Not Available | Positive | 1914653 - 1915060 | 14996.2 |
| mannose-1-phosphate guanylyltransferase | BVU_RS07265 | Not Available | Negative | 1915149 - 1916192 | 39478.3 |
| Trna-leu | Not Available | Not Available | Positive | 1916377 - 1916460 | Not Available |
| abi family protein | BVU_RS07275 | Not Available | Negative | 1916573 - 1917235 | 26056.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

