Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS06980 | Not Available | Negative | 1840231 - 1841838 | 60451.7 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS06985 | Not Available | Negative | 1841851 - 1844856 | 110980.0 |
| glycoside hydrolase family 97 protein | BVU_RS06990 | Not Available | Negative | 1845222 - 1847438 | 84377.1 |
| glycoside hydrolase family 13 protein | BVU_RS06995 | Not Available | Negative | 1847480 - 1849330 | 70850.0 |
| duf6377 domain-containing protein | BVU_RS07000 | Not Available | Positive | 1849579 - 1851174 | 62507.7 |
| pl29 family lyase n-terminal domain-containing protein | BVU_RS07005 | Not Available | Negative | 1851666 - 1854239 | 93058.3 |
| helix-turn-helix domain-containing protein | BVU_RS07010 | Not Available | Negative | 1854312 - 1854797 | 19011.1 |
| mfs transporter | BVU_RS07015 | Not Available | Negative | 1855502 - 1856857 | 49044.2 |
| 4-alpha-glucanotransferase | BVU_RS07020 | Not Available | Negative | 1856931 - 1859609 | 104482.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | BVU_RS07025 | Not Available | Negative | 1859937 - 1861901 | 72969.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

