Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | BVU_RS06935 | Not Available | Negative | 1828345 - 1829970 | 63080.8 |
| ribonuclease hii | BVU_RS06940 | Not Available | Positive | 1830072 - 1830677 | 22930.4 |
| l-fucose:h+ symporter permease | BVU_RS06945 | Not Available | Negative | 1830820 - 1832133 | 48465.5 |
| l-fucose isomerase | BVU_RS06950 | Not Available | Negative | 1832245 - 1834020 | 65624.0 |
| gntr family transcriptional regulator | BVU_RS06955 | Not Available | Negative | 1834042 - 1835022 | 38069.7 |
| hypothetical protein | BVU_RS22360 | Not Available | Positive | 1835207 - 1835380 | 6477.13 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | BVU_RS06960 | Not Available | Positive | 1835470 - 1836984 | 55852.0 |
| duf3109 family protein | BVU_RS06965 | Not Available | Positive | 1837087 - 1837668 | 22127.6 |
| porin | BVU_RS06970 | Not Available | Positive | 1837736 - 1838923 | 44355.6 |
| suse domain-containing protein | BVU_RS06975 | Not Available | Negative | 1839107 - 1840213 | 40840.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

