Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | BVU_RS00490 | Not Available | Positive | 135713 - 136948 | 47212.3 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | BVU_RS00495 | Not Available | Positive | 137081 - 138121 | 36895.4 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | BVU_RS00500 | Not Available | Positive | 138127 - 139512 | 51127.1 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | BVU_RS00505 | Not Available | Positive | 139529 - 140296 | 27740.6 |
| is1096 element passenger tnpr family protein | BVU_RS00510 | Not Available | Positive | 140359 - 140922 | 21611.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | BVU_RS00515 | Not Available | Positive | 140974 - 141876 | 35088.3 |
| alpha-l-fucosidase | BVU_RS00520 | Not Available | Positive | 141885 - 143924 | 76768.4 |
| hypothetical protein | BVU_RS00525 | Not Available | Negative | 144102 - 144875 | 29871.5 |
| right-handed parallel beta-helix repeat-containing protein | BVU_RS00530 | Not Available | Negative | 145131 - 146909 | 66487.2 |
| gfo/idh/moca family protein | BVU_RS00535 | Not Available | Negative | 147270 - 148820 | 57407.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

