Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BVU_RS06735 | Not Available | Negative | 1777541 - 1777924 | 15190.0 |
| hemolysin family protein | BVU_RS06740 | Not Available | Negative | 1777947 - 1779233 | 48001.9 |
| nudix domain-containing protein | BVU_RS06745 | Not Available | Positive | 1779368 - 1779892 | 19830.5 |
| tetratricopeptide repeat protein | BVU_RS06750 | Not Available | Positive | 1779902 - 1782805 | 111213.0 |
| tonb-dependent receptor | BVU_RS06755 | Not Available | Positive | 1782829 - 1784526 | 64322.7 |
| type i dna topoisomerase | BVU_RS06760 | Not Available | Positive | 1784648 - 1787086 | 91403.2 |
| shikimate kinase | BVU_RS06765 | Not Available | Positive | 1787083 - 1787610 | 20453.7 |
| biosynthetic arginine decarboxylase | BVU_RS06770 | Not Available | Positive | 1787652 - 1789544 | 71492.0 |
| acetylglutamate kinase | BVU_RS06775 | Not Available | Positive | 1789549 - 1790322 | 27177.1 |
| rna polymerase sigma factor | BVU_RS06780 | Not Available | Positive | 1790386 - 1790895 | 20158.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

