Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix dna-binding protein | BVU_RS06635 | Not Available | Positive | 1758310 - 1758657 | 13249.2 |
| m15 family metallopeptidase | BVU_RS06640 | Not Available | Positive | 1758681 - 1759346 | 25264.8 |
| thump-like domain-containing protein | BVU_RS06645 | Not Available | Positive | 1759350 - 1760534 | 43827.0 |
| response regulator transcription factor | BVU_RS06650 | Not Available | Negative | 1760531 - 1761214 | 26124.8 |
| sensor histidine kinase | BVU_RS06655 | Not Available | Negative | 1761219 - 1762757 | 59426.3 |
| outer membrane beta-barrel family protein | BVU_RS06660 | Not Available | Positive | 1762809 - 1764881 | 79105.4 |
| sufe family protein | BVU_RS06665 | Not Available | Negative | 1764917 - 1765345 | 16169.5 |
| m20 family metallopeptidase | BVU_RS06670 | Not Available | Negative | 1765357 - 1766361 | 37800.6 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | BVU_RS06675 | Not Available | Negative | 1766430 - 1768187 | 64913.2 |
| phosphate acyltransferase | BVU_RS06680 | Not Available | Positive | 1768270 - 1769178 | 33285.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

