Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00341 family protein | BVU_RS06525 | Not Available | Positive | 1739500 - 1740864 | 50535.2 |
| s46 family peptidase | BVU_RS06530 | Not Available | Positive | 1740869 - 1742995 | 80074.8 |
| dead/deah box helicase | BVU_RS06535 | Not Available | Negative | 1743316 - 1745190 | 70716.0 |
| helix-turn-helix domain-containing protein | BVU_RS06540 | Not Available | Negative | 1745452 - 1745664 | 7789.65 |
| duf2975 domain-containing protein | BVU_RS06550 | Not Available | Negative | 1745936 - 1746583 | 24199.5 |
| duf2975 domain-containing protein | BVU_RS06555 | Not Available | Negative | 1746600 - 1747247 | 23980.7 |
| cpbp family intramembrane glutamic endopeptidase | BVU_RS06560 | Not Available | Negative | 1747256 - 1748086 | 30303.9 |
| hypothetical protein | BVU_RS06565 | Not Available | Negative | 1748259 - 1748558 | 11054.1 |
| duf3836 domain-containing protein | BVU_RS06570 | Not Available | Negative | 1748558 - 1748977 | 16015.9 |
| bifunctional riboflavin kinase/fad synthetase | BVU_RS06580 | Not Available | Negative | 1749356 - 1750276 | 35285.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

