Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | BVU_RS06475 | Not Available | Positive | 1723527 - 1725137 | 62447.3 |
| fimbrillin family protein | BVU_RS06480 | Not Available | Positive | 1725435 - 1726430 | 37331.4 |
| fimb/mfa2 family fimbrial subunit | BVU_RS06485 | Not Available | Positive | 1726427 - 1727743 | 47508.9 |
| vape domain-containing protein | BVU_RS06490 | Not Available | Negative | 1727871 - 1729484 | 60846.3 |
| is1182 family transposase | BVU_RS06500 | Not Available | Negative | 1730815 - 1732470 | 65403.9 |
| hypothetical protein | BVU_RS06505 | Not Available | Negative | 1732643 - 1735369 | 97925.1 |
| helix-turn-helix transcriptional regulator | BVU_RS21375 | Not Available | Negative | 1735431 - 1735685 | 9685.68 |
| site-specific integrase | BVU_RS06510 | Not Available | Negative | 1735775 - 1736893 | 43257.0 |
| holliday junction branch migration dna helicase ruvb | BVU_RS06515 | Not Available | Positive | 1737020 - 1738048 | 38022.6 |
| lipopolysaccharide biosynthesis protein | BVU_RS06520 | Not Available | Positive | 1738052 - 1739497 | 54344.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

