Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | BVU_RS06375 | Not Available | Positive | 1691421 - 1692233 | 28669.7 |
| mannonate dehydratase | BVU_RS06380 | Not Available | Positive | 1692273 - 1693448 | 44467.5 |
| transposase | BVU_RS06385 | Not Available | Positive | 1693714 - 1695072 | 52906.8 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS06390 | Not Available | Positive | 1695342 - 1698596 | 120231.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS06395 | Not Available | Positive | 1698609 - 1700450 | 69044.9 |
| sulfatase | BVU_RS06400 | Not Available | Positive | 1700484 - 1702064 | 61341.8 |
| hybrid sensor histidine kinase/response regulator transcription factor | BVU_RS06405 | Not Available | Negative | 1702121 - 1706008 | 148455.0 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | BVU_RS06410 | Not Available | Negative | 1706214 - 1708670 | 92119.2 |
| m16 family metallopeptidase | BVU_RS06415 | Not Available | Negative | 1708769 - 1709989 | 46475.2 |
| tigr00730 family rossman fold protein | BVU_RS06420 | Not Available | Positive | 1710095 - 1710628 | 19738.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

