Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | BVU_RS06275 | Not Available | Positive | 1665984 - 1666739 | 27308.1 |
| helix-turn-helix domain-containing protein | BVU_RS06280 | Not Available | Negative | 1666804 - 1667664 | 33239.9 |
| fimbrillin family protein | BVU_RS06285 | Not Available | Negative | 1668170 - 1669159 | 35820.3 |
| duf5119 domain-containing protein | BVU_RS06290 | Not Available | Negative | 1669208 - 1670203 | 36267.8 |
| duf3575 domain-containing protein | BVU_RS06295 | Not Available | Negative | 1670170 - 1671537 | 52156.3 |
| alpha-l-fucosidase | BVU_RS06300 | Not Available | Positive | 1672132 - 1674015 | 70615.9 |
| dna-processing protein dpra | BVU_RS06305 | Not Available | Negative | 1674096 - 1675211 | 40930.4 |
| acyl-coa thioesterase | BVU_RS06310 | Not Available | Negative | 1675208 - 1675615 | 15657.8 |
| pp_01224 | BVU_RS06315 | Not Available | Positive | 1675674 - 1676591 | Not Available |
| duf3874 domain-containing protein | BVU_RS06320 | Not Available | Positive | 1677111 - 1678367 | 48877.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

