Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | BVU_RS06225 | Not Available | Positive | 1652406 - 1655174 | 104181.0 |
| metallophosphoesterase | BVU_RS06230 | Not Available | Positive | 1655185 - 1656156 | 37239.9 |
| calcium/sodium antiporter | BVU_RS06235 | Not Available | Positive | 1656220 - 1657182 | 33528.8 |
| hypothetical protein | BVU_RS06240 | Not Available | Positive | 1657257 - 1658393 | 43785.1 |
| dna topoisomerase iv subunit b | BVU_RS06245 | Not Available | Positive | 1658424 - 1660301 | 71021.8 |
| pantetheine-phosphate adenylyltransferase | BVU_RS06250 | Not Available | Positive | 1660319 - 1660774 | 17350.0 |
| s41 family peptidase | BVU_RS06255 | Not Available | Positive | 1660777 - 1662378 | 60827.7 |
| phosphatase pap2 family protein | BVU_RS06260 | Not Available | Negative | 1662482 - 1663093 | 22003.9 |
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | BVU_RS06265 | Not Available | Positive | 1663284 - 1663970 | 25487.5 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | BVU_RS06270 | Not Available | Positive | 1664005 - 1665963 | 72651.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

