Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein l,d-transpeptidase catalytic domain family protein | BVU_RS06170 | Not Available | Negative | 1641408 - 1642163 | 27616.2 |
| l,d-transpeptidase | BVU_RS06175 | Not Available | Negative | 1642208 - 1643227 | 38884.9 |
| tyrosine-type recombinase/integrase | BVU_RS06180 | Not Available | Positive | 1643435 - 1644373 | 36160.6 |
| helix-turn-helix domain-containing protein | BVU_RS06185 | Not Available | Positive | 1645185 - 1645679 | 19177.3 |
| hypothetical protein | BVU_RS06190 | Not Available | Positive | 1645724 - 1646551 | 29624.1 |
| hypothetical protein | BVU_RS06195 | Not Available | Positive | 1646624 - 1647028 | 14964.8 |
| is66 family insertion sequence element accessory protein tnpb | BVU_RS06200 | Not Available | Positive | 1647016 - 1647366 | 13608.7 |
| is66 family transposase | BVU_RS06205 | Not Available | Positive | 1647453 - 1649018 | 60533.4 |
| hypothetical protein | BVU_RS06210 | Not Available | Positive | 1649138 - 1651285 | 78660.3 |
| hypothetical protein | BVU_RS06215 | Not Available | Positive | 1651369 - 1651848 | 18255.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

