Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3098 domain-containing protein | BVU_RS05915 | Not Available | Positive | 1585374 - 1585619 | 9145.44 |
| undecaprenyl-diphosphate phosphatase | BVU_RS05920 | Not Available | Positive | 1585657 - 1586457 | 28480.0 |
| trna pseudouridine(55) synthase trub | BVU_RS05925 | Not Available | Positive | 1586462 - 1587169 | 26653.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | BVU_RS05930 | Not Available | Positive | 1587181 - 1588236 | 40182.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BVU_RS05935 | Not Available | Positive | 1588255 - 1588701 | 16503.0 |
| thiol-activated cytolysin family protein | BVU_RS05940 | Not Available | Negative | 1589113 - 1589973 | 32446.3 |
| hypothetical protein | BVU_RS05945 | Not Available | Negative | 1590003 - 1590575 | 22529.2 |
| duf3244 domain-containing protein | BVU_RS05950 | Not Available | Negative | 1590587 - 1590955 | 13903.9 |
| tetratricopeptide repeat protein | BVU_RS05955 | Not Available | Negative | 1591138 - 1592832 | 65577.8 |
| is66-like element isbvu4 family transposase | BVU_RS05960 | Not Available | Negative | 1593108 - 1594721 | 61911.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

