Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator transcription factor | BVU_RS05815 | Not Available | Positive | 1549211 - 1553194 | 152753.0 |
| sugar-binding domain-containing protein | BVU_RS05820 | Not Available | Positive | 1553334 - 1555772 | 92971.0 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS05825 | Not Available | Positive | 1555806 - 1558859 | 113928.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS05830 | Not Available | Positive | 1558874 - 1560655 | 68797.7 |
| s41 family peptidase | BVU_RS05835 | Not Available | Negative | 1560722 - 1563946 | 120823.0 |
| rna polymerase sigma-70 factor | BVU_RS05840 | Not Available | Positive | 1564125 - 1564712 | 22777.2 |
| fecr family protein | BVU_RS05845 | Not Available | Positive | 1564801 - 1565811 | 38718.6 |
| tonb-dependent receptor | BVU_RS05850 | Not Available | Positive | 1565876 - 1569403 | 131521.0 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS05855 | Not Available | Positive | 1569425 - 1571347 | 73085.9 |
| sulfatase | BVU_RS05860 | Not Available | Positive | 1571442 - 1572863 | 52951.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

