Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | BVU_RS00385 | Not Available | Negative | 105521 - 106378 | 31996.1 |
| duf4924 family protein | BVU_RS00390 | Not Available | Negative | 106393 - 106935 | 21312.0 |
| lyse family translocator | BVU_RS00395 | Not Available | Negative | 107007 - 107666 | 24319.7 |
| phosphoribosylformylglycinamidine synthase | BVU_RS00400 | Not Available | Positive | 107817 - 111521 | 137142.0 |
| hybrid sensor histidine kinase/response regulator transcription factor | BVU_RS00405 | Not Available | Positive | 111599 - 115615 | 154412.0 |
| chromate transporter | BVU_RS00410 | Not Available | Positive | 115620 - 116168 | 20451.8 |
| chromate transporter | BVU_RS00415 | Not Available | Positive | 116165 - 116737 | 21054.4 |
| glycoside hydrolase family 10 protein | BVU_RS00420 | Not Available | Negative | 117024 - 118523 | 58071.4 |
| excinuclease abc subunit uvra | BVU_RS00425 | Not Available | Positive | 118605 - 121406 | 104874.0 |
| endonuclease/exonuclease/phosphatase family protein | BVU_RS00430 | Not Available | Positive | 121652 - 122683 | 39607.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

