Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | BVU_RS05765 | Not Available | Negative | 1535145 - 1535921 | 29335.2 |
| helix-hairpin-helix domain-containing protein | BVU_RS05770 | Not Available | Negative | 1535967 - 1538039 | 81258.1 |
| duf4294 domain-containing protein | BVU_RS05775 | Not Available | Positive | 1538202 - 1538708 | 19619.1 |
| rna methyltransferase | BVU_RS05780 | Not Available | Negative | 1538739 - 1539275 | 20012.2 |
| outer membrane beta-barrel protein | BVU_RS05785 | Not Available | Positive | 1539997 - 1542315 | 88745.1 |
| quinolinate synthase nada | BVU_RS05790 | Not Available | Positive | 1542417 - 1543409 | 36608.0 |
| non-canonical purine ntp diphosphatase | BVU_RS05795 | Not Available | Negative | 1543664 - 1544245 | 21352.7 |
| gnat family n-acetyltransferase | BVU_RS05800 | Not Available | Positive | 1544405 - 1544932 | 20715.6 |
| yitt family protein | BVU_RS05805 | Not Available | Negative | 1545031 - 1545927 | 33215.4 |
| leucine--trna ligase | BVU_RS05810 | Not Available | Negative | 1546009 - 1548843 | 108279.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

