Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 43 glycosylhydrolase | BVU_RS05675 | Not Available | Negative | 1500018 - 1502420 | 89865.8 |
| glycoside hydrolase family 97 catalytic domain-containing protein | BVU_RS05680 | Not Available | Negative | 1502457 - 1505180 | 103267.0 |
| duf6055 domain-containing protein | BVU_RS05685 | Not Available | Negative | 1505379 - 1507643 | 84424.6 |
| hypothetical protein | BVU_RS22355 | Not Available | Negative | 1507670 - 1507819 | 5429.76 |
| duf4859 domain-containing protein | BVU_RS05690 | Not Available | Negative | 1507899 - 1508909 | 36202.2 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS05695 | Not Available | Negative | 1508941 - 1510620 | 63688.1 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS05700 | Not Available | Negative | 1510641 - 1513670 | 112994.0 |
| glycoside hydrolase family 127 protein | BVU_RS05705 | Not Available | Negative | 1513705 - 1516140 | 91067.9 |
| master dna invertase mpi family serine-type recombinase | BVU_RS05710 | Not Available | Positive | 1516519 - 1517130 | 23063.3 |
| pd-(d/e)xk nuclease domain-containing protein | BVU_RS05715 | Not Available | Negative | 1517971 - 1518534 | 21872.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

