Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orf6n domain-containing protein | BVU_RS05625 | Not Available | Negative | 1478934 - 1479494 | 21549.0 |
| l-aspartate oxidase | BVU_RS05630 | Not Available | Positive | 1479650 - 1481230 | 58967.6 |
| atp-binding protein | BVU_RS05635 | Not Available | Positive | 1481480 - 1483207 | 67951.9 |
| duf1593 domain-containing protein | BVU_RS05640 | Not Available | Negative | 1483256 - 1484611 | 51266.5 |
| pectate lyase | BVU_RS05645 | Not Available | Negative | 1484628 - 1486769 | 81702.4 |
| hypothetical protein | BVU_RS05650 | Not Available | Negative | 1487038 - 1489350 | 86455.1 |
| ragb/susd family nutrient uptake outer membrane protein | BVU_RS05655 | Not Available | Negative | 1489370 - 1491409 | 76726.5 |
| susc/raga family tonb-linked outer membrane protein | BVU_RS05660 | Not Available | Negative | 1491422 - 1494757 | 122693.0 |
| s9 family peptidase | BVU_RS05665 | Not Available | Negative | 1495287 - 1497530 | 85692.8 |
| glycoside hydrolase family 127 protein | BVU_RS05670 | Not Available | Negative | 1497542 - 1499947 | 89713.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

