Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter atp-binding protein | BVU_RS05575 | Not Available | Positive | 1466781 - 1467548 | 28695.6 |
| duf2723 domain-containing protein | BVU_RS05580 | Not Available | Positive | 1468009 - 1471413 | 129139.0 |
| polysaccharide deacetylase family protein | BVU_RS05585 | Not Available | Positive | 1471484 - 1472095 | 24627.9 |
| duf4861 domain-containing protein | BVU_RS05590 | Not Available | Negative | 1472153 - 1473325 | 42916.6 |
| gluconate 5-dehydrogenase | BVU_RS05595 | Not Available | Negative | 1473422 - 1474225 | 28589.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | BVU_RS05600 | Not Available | Negative | 1474262 - 1475104 | 31850.9 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | BVU_RS05605 | Not Available | Negative | 1475275 - 1476675 | 52348.7 |
| dihydrolipoyl dehydrogenase | BVU_RS05610 | Not Available | Negative | 1476675 - 1478015 | 47674.8 |
| ph domain-containing protein | BVU_RS05615 | Not Available | Negative | 1478031 - 1478444 | 15716.4 |
| ph domain-containing protein | BVU_RS05620 | Not Available | Negative | 1478448 - 1478858 | 15494.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

