Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BVU_RS22680 | Not Available | Negative | 1453806 - 1453928 | 4662.98 |
| thump domain-containing protein | BVU_RS05530 | Not Available | Positive | 1454238 - 1455686 | 56204.3 |
| s9 family peptidase | BVU_RS05535 | Not Available | Positive | 1455693 - 1457906 | 83577.3 |
| phosphoribosylamine--glycine ligase | BVU_RS05540 | Not Available | Positive | 1457922 - 1459190 | 45595.0 |
| hypothetical protein | BVU_RS05545 | Not Available | Positive | 1459209 - 1460144 | 35910.8 |
| yqaa family protein | BVU_RS05550 | Not Available | Positive | 1460120 - 1460587 | 17015.3 |
| trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd | BVU_RS05555 | Not Available | Positive | 1460592 - 1461275 | 26033.9 |
| pl29 family lyase n-terminal domain-containing protein | BVU_RS05560 | Not Available | Negative | 1461628 - 1464636 | 110570.0 |
| helix-turn-helix domain-containing protein | BVU_RS05565 | Not Available | Negative | 1464694 - 1465191 | 19135.2 |
| metal abc transporter solute-binding protein, zn/mn family | BVU_RS05570 | Not Available | Positive | 1465866 - 1466771 | 33993.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

