Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c45 family autoproteolytic acyltransferase/hydolase | BVU_RS05230 | Not Available | Positive | 1368601 - 1370265 | 63093.3 |
| phenylacetate--coa ligase family protein | BVU_RS05235 | Not Available | Positive | 1370267 - 1371562 | 49526.5 |
| hypothetical protein | BVU_RS05240 | Not Available | Positive | 1371613 - 1372188 | 21488.1 |
| atp-binding protein | BVU_RS05245 | Not Available | Negative | 1372306 - 1374729 | 92899.8 |
| hypothetical protein | BVU_RS05250 | Not Available | Positive | 1374928 - 1375749 | 30751.9 |
| duf3108 domain-containing protein | BVU_RS05255 | Not Available | Negative | 1375838 - 1376647 | 31356.0 |
| ig-like domain-containing domain | BVU_RS05260 | Not Available | Negative | 1376644 - 1378566 | 73370.4 |
| gh3 auxin-responsive promoter family protein | BVU_RS05265 | Not Available | Negative | 1378571 - 1380076 | 57457.0 |
| atp-dependent 6-phosphofructokinase | BVU_RS05270 | Not Available | Positive | 1380224 - 1381234 | 35787.3 |
| helix-turn-helix transcriptional regulator | BVU_RS05275 | Not Available | Negative | 1381244 - 1385318 | 150584.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

