Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m3 family metallopeptidase | BVU_RS05030 | Not Available | Negative | 1311367 - 1313454 | 78974.4 |
| endonuclease/exonuclease/phosphatase family protein | BVU_RS05035 | Not Available | Negative | 1313481 - 1314560 | 40291.9 |
| rhomboid family intramembrane serine protease | BVU_RS05040 | Not Available | Negative | 1314564 - 1315457 | 33974.6 |
| rhomboid family intramembrane serine protease | BVU_RS05045 | Not Available | Negative | 1315438 - 1316115 | 25332.5 |
| hu family dna-binding protein | BVU_RS05050 | Not Available | Positive | 1316326 - 1316598 | 9278.25 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | BVU_RS05055 | Not Available | Positive | 1316691 - 1320020 | 125950.0 |
| virulence rhum family protein | BVU_RS05060 | Not Available | Positive | 1320192 - 1320662 | 18238.8 |
| trna 2-thiouridine(34) synthase mnma | BVU_RS05065 | Not Available | Positive | 1320665 - 1321720 | 40166.7 |
| sulfatase family protein | BVU_RS05070 | Not Available | Positive | 1321868 - 1323430 | 57625.2 |
| alpha-l-arabinofuranosidase c-terminal domain-containing protein | BVU_RS05075 | Not Available | Negative | 1324232 - 1326211 | 75354.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

