Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | ATCC 8482 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494665 bp
Thymine Count
1489581 bp
Guanine Count
1084578 bp
Cytosine Count
1094365 bp
Genome Length
5163189 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BVU_RS04880 | Not Available | Positive | 1269264 - 1269668 | 14894.2 |
| hypothetical protein | BVU_RS04885 | Not Available | Positive | 1269674 - 1271029 | 49768.9 |
| lpd23 domain-containing protein | BVU_RS04890 | Not Available | Positive | 1271168 - 1274629 | 129819.0 |
| type iv secretory system conjugative dna transfer family protein | BVU_RS04900 | Not Available | Positive | 1275041 - 1276645 | 61220.6 |
| duf5712 family protein | BVU_RS04905 | Not Available | Negative | 1276658 - 1277608 | 37426.6 |
| bfma/btga family mobilization protein | BVU_RS04910 | Not Available | Negative | 1277598 - 1278140 | 20817.4 |
| amidoligase family protein | BVU_RS04915 | Not Available | Positive | 1278766 - 1279713 | 36207.5 |
| hypothetical protein | BVU_RS04920 | Not Available | Positive | 1279710 - 1279955 | 9349.03 |
| helix-turn-helix transcriptional regulator | BVU_RS04925 | Not Available | Positive | 1280346 - 1282008 | 58171.6 |
| is21-like element helper atpase istb | BVU_RS04930 | Not Available | Positive | 1281995 - 1282792 | 30625.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

